Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:41 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim85beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim85beagle.txt) Running time for phasing: 43 minutes 22 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:53 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim86beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim86beagle.txt) Running time for phasing: 44 minutes 25 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:11 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim87beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim87beagle.txt) Running time for phasing: 42 minutes 20 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:18 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim88beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim88beagle.txt) Running time for phasing: 42 minutes 21 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:24 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim89beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim89beagle.txt) Running time for phasing: 39 minutes 21 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:39 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim90beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim90beagle.txt) Running time for phasing: 42 minutes 22 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:12 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim91beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim91beagle.txt) Running time for phasing: 40 minutes 55 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:41 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim92beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim92beagle.txt) Running time for phasing: 35 minutes 38 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:48 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim93beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim93beagle.txt) Running time for phasing: 37 minutes 33 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:15 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim94beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim94beagle.txt) Running time for phasing: 36 minutes 55 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:22 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim95beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim95beagle.txt) Running time for phasing: 44 minutes 30 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:27 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim96beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim96beagle.txt) Running time for phasing: 53 minutes 23 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:13 AM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim97beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim97beagle.txt) Running time for phasing: 1 hours 12 minutes 49 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:59 AM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim98beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim98beagle.txt) Running time for phasing: 1 hours 16 minutes 27 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 09:52 PM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim99beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim99beagle.txt) Running time for phasing: 46 minutes 24 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:40 AM CET on 14 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim100beagle.txt fastibd=true missing=N out=beagleresc.txt number of markers = 10000 number of haplotypes = 2000 (dataSim100beagle.txt) Running time for phasing: 1 hours 9 minutes 54 seconds Beagle version 3.3.2 (31 Oct 2011) finished