Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:39 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim68beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim68beagle.txt) Running time for phasing: 43 minutes 10 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:52 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim69beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim69beagle.txt) Running time for phasing: 46 minutes 10 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:31 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim70beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim70beagle.txt) Running time for phasing: 43 minutes 18 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:01 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim71beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim71beagle.txt) Running time for phasing: 42 minutes 39 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:39 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim72beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim72beagle.txt) Running time for phasing: 41 minutes 19 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:05 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim73beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim73beagle.txt) Running time for phasing: 40 minutes 38 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:39 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim74beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim74beagle.txt) Running time for phasing: 42 minutes 20 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:06 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim75beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim75beagle.txt) Running time for phasing: 44 minutes 0 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:16 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim76beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim76beagle.txt) Running time for phasing: 44 minutes 41 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:48 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim77beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim77beagle.txt) Running time for phasing: 45 minutes 44 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:18 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim78beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim78beagle.txt) Running time for phasing: 41 minutes 46 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:43 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim79beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim79beagle.txt) Running time for phasing: 37 minutes 29 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:51 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim80beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim80beagle.txt) Running time for phasing: 43 minutes 50 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:16 AM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim81beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim81beagle.txt) Running time for phasing: 47 minutes 26 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:05 PM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim82beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim82beagle.txt) Running time for phasing: 1 hours 57 minutes 33 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:10 AM CET on 14 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim83beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim83beagle.txt) Running time for phasing: 3 hours 53 minutes 2 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:28 AM CET on 14 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim84beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim84beagle.txt) Running time for phasing: 47 minutes 35 seconds Beagle version 3.3.2 (31 Oct 2011) finished