Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:37 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim66beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim66beagle.txt) Running time for phasing: 42 minutes 44 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:18 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim67beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim67beagle.txt) Running time for phasing: 44 minutes 43 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:52 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim68beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim68beagle.txt) Running time for phasing: 43 minutes 27 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:20 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim69beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim69beagle.txt) Running time for phasing: 47 minutes 13 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:01 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim70beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim70beagle.txt) Running time for phasing: 44 minutes 34 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:38 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim71beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim71beagle.txt) Running time for phasing: 45 minutes 4 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:14 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim72beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim72beagle.txt) Running time for phasing: 42 minutes 47 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:37 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim73beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim73beagle.txt) Running time for phasing: 47 minutes 39 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:12 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim74beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim74beagle.txt) Running time for phasing: 42 minutes 6 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 03:43 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim75beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim75beagle.txt) Running time for phasing: 40 minutes 9 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 09:09 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim76beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim76beagle.txt) Running time for phasing: 44 minutes 4 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:52 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim77beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim77beagle.txt) Running time for phasing: 49 minutes 57 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:59 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim78beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim78beagle.txt) Running time for phasing: 42 minutes 20 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:51 AM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim79beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim79beagle.txt) Running time for phasing: 2 hours 38 minutes 56 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:59 PM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim80beagle.txt fastibd=true missing=N out=beagleresb.txt number of markers = 10000 number of haplotypes = 2000 (dataSim80beagle.txt) Running time for phasing: 1 hours 25 seconds Beagle version 3.3.2 (31 Oct 2011) finished