Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:36 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim52beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim52beagle.txt) Running time for phasing: 43 minutes 23 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:38 AM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim53beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim53beagle.txt) Running time for phasing: 40 minutes 21 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:10 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim54beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim54beagle.txt) Running time for phasing: 51 minutes 51 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:49 PM CET on 10 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim55beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim55beagle.txt) Running time for phasing: 42 minutes 1 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:25 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim56beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim56beagle.txt) Running time for phasing: 42 minutes 31 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:49 AM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim57beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim57beagle.txt) Running time for phasing: 42 minutes 38 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:26 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim58beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim58beagle.txt) Running time for phasing: 38 minutes 58 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:57 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim59beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim59beagle.txt) Running time for phasing: 41 minutes 50 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:37 PM CET on 11 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim60beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim60beagle.txt) Running time for phasing: 44 minutes 41 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:08 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim61beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim61beagle.txt) Running time for phasing: 47 minutes 24 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:47 AM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim62beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim62beagle.txt) Running time for phasing: 44 minutes 7 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:38 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim63beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim63beagle.txt) Running time for phasing: 56 minutes 42 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:32 PM CET on 12 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim64beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim64beagle.txt) Running time for phasing: 41 minutes 44 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:11 AM CET on 13 Jan 2012 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim65beagle.txt fastibd=true missing=N out=beagleresa.txt number of markers = 10000 number of haplotypes = 2000 (dataSim65beagle.txt) Running time for phasing: 49 minutes 2 seconds Beagle version 3.3.2 (31 Oct 2011) finished