Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:41 AM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim76beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim76beagle.txt) Running time for phasing: 25 minutes 1 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:14 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim77beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim77beagle.txt) Running time for phasing: 32 minutes 27 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:55 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim78beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim78beagle.txt) Running time for phasing: 21 minutes 11 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:25 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim79beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim79beagle.txt) Running time for phasing: 16 minutes 4 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:50 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim80beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim80beagle.txt) Running time for phasing: 14 minutes 46 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:16 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim81beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim81beagle.txt) Running time for phasing: 57 minutes 14 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 03:23 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim82beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim82beagle.txt) Running time for phasing: 15 minutes 17 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 03:45 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim83beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim83beagle.txt) Running time for phasing: 14 minutes 46 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:07 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim84beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim84beagle.txt) Running time for phasing: 17 minutes 46 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:34 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim85beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim85beagle.txt) Running time for phasing: 14 minutes 35 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:58 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim86beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim86beagle.txt) Running time for phasing: 14 minutes 34 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:21 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim87beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim87beagle.txt) Running time for phasing: 15 minutes 2 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:43 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim88beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim88beagle.txt) Running time for phasing: 14 minutes 45 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:06 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim89beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim89beagle.txt) Running time for phasing: 14 minutes 27 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:28 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim90beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim90beagle.txt) Running time for phasing: 14 minutes 38 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:50 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim91beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim91beagle.txt) Running time for phasing: 20 minutes 6 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:18 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim92beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim92beagle.txt) Running time for phasing: 14 minutes 45 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:42 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim93beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim93beagle.txt) Running time for phasing: 15 minutes 3 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:07 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim94beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim94beagle.txt) Running time for phasing: 14 minutes 22 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:30 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim95beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim95beagle.txt) Running time for phasing: 14 minutes 7 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:54 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim96beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim96beagle.txt) Running time for phasing: 14 minutes 41 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 09:18 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim97beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim97beagle.txt) Running time for phasing: 14 minutes 6 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 09:40 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim98beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim98beagle.txt) Running time for phasing: 14 minutes 33 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:02 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim99beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim99beagle.txt) Running time for phasing: 14 minutes 9 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:25 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim100beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim100beagle.txt) Running time for phasing: 14 minutes 49 seconds Beagle version 3.3.2 (31 Oct 2011) finished