Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 11:40 AM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim76beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim76beagle.txt) Running time for phasing: 24 minutes 0 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:11 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim77beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim77beagle.txt) Running time for phasing: 30 minutes 2 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 12:50 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim78beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim78beagle.txt) Running time for phasing: 24 minutes 13 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:23 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim79beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim79beagle.txt) Running time for phasing: 14 minutes 39 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 01:46 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim80beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim80beagle.txt) Running time for phasing: 15 minutes 19 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 02:16 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim81beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim81beagle.txt) Running time for phasing: 57 minutes 12 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 03:22 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim82beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim82beagle.txt) Running time for phasing: 15 minutes 38 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 03:47 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim83beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim83beagle.txt) Running time for phasing: 14 minutes 8 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:11 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim84beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim84beagle.txt) Running time for phasing: 16 minutes 14 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:35 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim85beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim85beagle.txt) Running time for phasing: 15 minutes 15 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 04:59 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim86beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim86beagle.txt) Running time for phasing: 14 minutes 35 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:20 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim87beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim87beagle.txt) Running time for phasing: 14 minutes 45 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 05:46 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim88beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim88beagle.txt) Running time for phasing: 14 minutes 38 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:08 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim89beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim89beagle.txt) Running time for phasing: 15 minutes 12 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:31 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim90beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim90beagle.txt) Running time for phasing: 14 minutes 47 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 06:57 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim91beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim91beagle.txt) Running time for phasing: 17 minutes 34 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:25 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim92beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim92beagle.txt) Running time for phasing: 15 minutes 16 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 07:47 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim93beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim93beagle.txt) Running time for phasing: 14 minutes 36 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:11 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim94beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim94beagle.txt) Running time for phasing: 15 minutes 32 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:35 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim95beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim95beagle.txt) Running time for phasing: 14 minutes 53 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 08:59 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim96beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim96beagle.txt) Running time for phasing: 14 minutes 54 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 09:22 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim97beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim97beagle.txt) Running time for phasing: 14 minutes 52 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 09:45 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim98beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim98beagle.txt) Running time for phasing: 14 minutes 36 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:09 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim99beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim99beagle.txt) Running time for phasing: 14 minutes 2 seconds Beagle version 3.3.2 (31 Oct 2011) finished Beagle version 3.3.2 (31 Oct 2011) Enter "java -jar beagle.jar" for summary of command line arguments. Start time: 10:32 PM CET on 11 Feb 2013 Command line: java -Xmx27159m -jar beagle.jar unphased=dataSim100beagle.txt fastibd=true missing=N out=beagleresd.txt number of markers = 10000 number of haplotypes = 2000 (dataSim100beagle.txt) Running time for phasing: 13 minutes 37 seconds Beagle version 3.3.2 (31 Oct 2011) finished